Publications

Ghatak A , Pierides I, Singh RK, Srivastava RK, Varshney RK, Prasad M et al. Millets for a sustainable future. Journal of Experimental Botany. 2025 Apr 9;76(6):1534-1545. Epub 2024 Dec 26. doi: 10.1093/jxb/erae507

Schwarzerova J, Olesova D, Jureckova K, Kvasnicka A, Kostoval A, Friedecky D et al. Enhanced metabolomic predictions using concept drift analysis: identification and correction of confounding factors. Bioinformatics advances. 2025 Apr 4;5(1):vbaf073. doi: 10.1093/bioadv/vbaf073

Zagorščak M, Abdelhakim L, Rodriguez-Granados NY, Široká J, Ghatak A, Bleker C et al. Integration of multi-omics data and deep phenotyping provides insights into responses to single and combined abiotic stress in potato. Plant Physiology. 2025 Apr 2;197(4). doi: 10.1093/plphys/kiaf126

Campbell R, Cowan G, Wurzinger B, Ducreux LJM, Dessoly J, Guo W et al. GERMIN3 regulates tuber initiation and axillary bud activation by facilitating plasmodesmatal gating. The Plant journal : for cell and molecular biology. 2025 Apr;122(2):e70186. doi: 10.1111/tpj.70186

Hussien N, Khalil M, Schagerl M, Ali S. Green Synthesis of Zinc Oxide Nanoparticles as a Promising Nanomedicine Approach for Anticancer, Antibacterial, and Anti-Inflammatory Therapies. International Journal of Nanomedicine. 2025 Apr;20:4299-4317. doi: 10.2147/IJN.S507214

Raza A, Anas M, Bhardwaj S, Mir RA, Charagh S, Elahi M et al. Harnessing metabolomics for enhanced crop drought tolerance. Crop Journal. 2025 Apr;13(2):311-327. doi: 10.1016/j.cj.2025.01.001

Fiser C, Zagmajster M, Kokalj AJ, Mali N, Sumrada T, Glavan M et al. Toward sustainable irrigation practices safeguarding groundwater biodiversity and ecosystem services. BioScience. 2025 Mar 28;biaf016. doi: 10.1093/biosci/biaf016

Zaragoza-Solas A, Baltar F. Ayu: a machine intelligence tool for identification of extracellular proteins in the marine secretome. Nature Communications. 2025 Mar 21;16(1):2793. doi: 10.1038/s41467-025-57974-5

Hager K, Luo ZH , Monserrat i Diez M, Ponce Toledo RI, Baur PA, Dahlke S et al. Diversity and environmental distribution of Asgard archaea in shallow saline sediments. Frontiers in Microbiology. 2025 Mar 18;16:1549128. doi: 10.3389/fmicb.2025.1549128

Elena AX, Orel N, Fang P, Herndl GJ, Berendonk TU, Tinta T et al. Jellyfish blooms-an overlooked hotspot and potential vector for the transmission of antimicrobial resistance in marine environments. mSystems. 2025 Mar 18;10(3):e01012-24. Epub 2025 Feb 12. doi: 10.1128/msystems.01012-24

Schagerl M, Yen CC, Bauer C, Gaspar L, Waringer J. Fishponds Are Hotspots of Algal Biodiversity—Organic Carp Farming Reveals Unexpected High Taxa Richness. Environments. 2025 Mar 15;12(3):92. doi: 10.3390/environments12030092

Ali SS, Al-Tohamy R, Al-Zahrani M, Schagerl M, Kornaros M, Sun J. Advancements and challenges in microalgal protein production: A sustainable alternative to conventional protein sources. Microbial Cell Factories. 2025 Mar 10;24(1):61. doi: 10.1186/s12934-025-02685-1

Zekri MA, Leimhofer C, Drexler N, Lang I. A rapid freezing method to determine tissue layer thickness in drought-stressed leaves. Journal of Microscopy. 2025 Mar;297(3):316-324. Epub 2024 Jan 28. doi: 10.1111/jmi.13272

Totis N, Christiaens AS, Smets I, Waldherr S. Coupling activated sludge models and population balance models to predict size distribution dynamics of nitrifier microcolonies in sludge flocs. Journal of Water Process Engineering. 2025 Mar;71:107085. Epub 2025 Feb 5. doi: 10.1016/j.jwpe.2025.107085

Zittra C, Moog O. Das bemerkenswerte Auftreten der Riesenschnake Tipula maxima Poda, 1761 (Diptera: Tipulidae) an heißen Tagen in subterranen Lebensräumen. Entomologica Austriaca: Zeitschrift der Österreichischen Entomologischen Gesellschaft. 2025 Mar;31.

Alves N, Spinelli ML, Martín J, Malits A, Capitanio FL. Ecological role of pelagic appendicularians in sub-Antarctic coastal and oceanic waters of the Southwest Atlantic Ocean. Polar Biology. 2025 Mar;48(1):28. doi: 10.1007/s00300-024-03331-z

Bulgheresi S. Brave Genomes: Microbial Genome Plasticity in the Face of Environmental Challenge. Elsevier Academic Press, 2025. 332 p.

Beas JZ, Folgosa F, Karavaeva V , Baltazar de Lima de Sousa MF, Saraiva LM. A novel type of hemoglobin confers host-derived nitric oxide resistance to the opportunistic pathogen Acinetobacter baumannii. Scientific Reports. 2025 Feb 18;15:5969. doi: 10.1038/s41598-025-88123-z

Khalil MA, Alzaidi TM, Alsharbaty MHM, Ali SS, Schagerl M, Elhariry HM et al. Synergistic Antibacterial and Antibiofilm Effects of Clindamycin and Zinc Oxide Nanoparticles Against Pathogenic Oral Bacillus Species. Pathogens. 2025 Feb 2;14(2):138. doi: 10.3390/pathogens14020138

Routray D, Petijová L, Sabovljević M, Lang I , Afjehi-Sadat L, Demko V et al. Allelopathic influence of usnic acid on Physcomitrium patens: A proteomics approach. Plant Physiology and Biochemistry. 2025 Feb;219:109400. Epub 2024 Dec 13. doi: 10.1016/j.plaphy.2024.109400