Publications
Showing entries 1 - 20 out of 1021
2024
Zhao Z, Baltar F, Herndl GJ. Decoupling between the genetic potential and the metabolic regulation and expression in microbial organic matter cleavage across microbiomes. Microbiology Spectrum. 2024 May 2;12(5):e0303623. Epub 2024. doi: 10.1128/spectrum.03036-23
Cai Z, Li W, Hager S, Wilson JL, Afjehi-Sadat L, Heiss EH et al. Targeting PHGDH reverses the immunosuppressive phenotype of tumor-associated macrophages through α-ketoglutarate and mTORC1 signaling. Cellular and Molecular Immunology. 2024 May;21(5):448-465. Epub 2024. doi: 10.1038/s41423-024-01134-0
Martins M, Sousa F, Soares C, Sousa B, Pereira R, Rubal M et al. Beach wrack: Discussing ecological roles, risks, and sustainable bioenergy and agricultural applications. Journal of Environmental Management. 2024 Apr;356:120526. 120526. doi: 10.1016/j.jenvman.2024.120526
Lintner M, Schagerl M, Lintner B, Wanek W, Golen J, Tyszka J et al. Impact of pesticides on marine coral reef foraminifera. Marine Pollution Bulletin. 2024 Apr;201:116237. Epub 2024 Mar 8. doi: 10.1016/j.marpolbul.2024.116237
Bubl M, Heinz P, Wanek W, Schagerl M, Hofmann T, Lintner M. Impact of heavy metals (Cu, Fe, Pb, Zn) on carbon and nitrogen uptake of the diatom-bearing benthic foraminifera Heterostegina depressa. Heliyon. 2024 Mar 30;10(6):e27229. doi: 10.1016/j.heliyon.2024.e27229
Kushkevych I, Martínková K, Mráková L, Giudici F, Baldi S, Novak D et al. Comparison of microbial communities and the profile of sulfate-reducing bacteria in patients with ulcerative colitis and their association with bowel diseases: a pilot study. Microbial Cell. 2024 Mar 14;11(1):79-89. doi: 10.15698/mic2024.03.817
Zhang S, Ghatak A, Mohammad Bazargani M, Kramml H, Zang F, Gao S et al. Cell-type proteomic and metabolomic resolution of early and late grain filling stages of wheat endosperm. Plant Biotechnology Journal. 2024 Mar;22(3):555-571. Epub 2023 Dec. doi: 10.1111/pbi.14203
Kudapa H, Ghatak A, Barmukh R, Chaturvedi P, Khan A, Kale S et al. Integrated multi-omics analysis reveals drought stress response mechanism in chickpea (Cicer arietinum L.). Plant Genome. 2024 Mar;17(1):e20337. doi: 10.1002/tpg2.20337
Zekri MA, Lang I. Automated Segmentation and 3D Reconstruction of Different Membranes from Confocal Z-Stacks. In Kriechbaumer V, editor, The Plant Endoplasmic Reticulum: Methods and Protocols. 2. ed. Humana, New York: Springer. 2024. p. 353-370. (Methods in Molecular Biology, Vol. 2772). doi: 10.1007/978-1-0716-3710-4_27
Zvereva AS, Klingenbrunner M, Teige M. Calcium signaling: an emerging player in plant antiviral defense. Journal of Experimental Botany. 2024 Feb 28;75(5):1265-1273. Epub 2023 Nov 6. doi: 10.1093/jxb/erad442
Fadeev E, Hennenfeind JH, Amano C, Zhao Z, Klun K, Herndl GJ et al. Bacterial degradation of ctenophore Mnemiopsis leidyi organic matter. mSystems. 2024 Feb 20;9(2):e01264-23. Epub 2024 Jan 23. doi: 10.1128/msystems.01264-23
Salazar-Alekseyeva K, Herndl GJ, Baltar F. Influence of Salinity on the Extracellular Enzymatic Activities of Marine Pelagic Fungi. Journal of Fungi. 2024 Feb 13;10(2):152. doi: 10.3390/jof10020152
Raes B, Wang J, Horemans B, Dirckx L, Waldherr S, Kohler HPE et al. The Growth Yield of Aminobacter niigataensis MSH1 on the Micropollutant 2,6-Dichlorobenzamide Decreases Substantially at Trace Substrate Concentrations. Environmental Science and Technology. 2024 Feb 13;58(6):2859-2869. doi: 10.1021/acs.est.3c06883
Orel N, Fadeev E, Herndl GJ, Turk V, Tinta T. Recovering high-quality bacterial genomes from cross-contaminated cultures: a case study of marine Vibrio campbellii. BMC Genomics. 2024 Feb 6;25(1):146. doi: 10.1186/s12864-024-10062-2
Bychkova S, Bychkov M, Dordevic D, Vítězová M, Rittmann SK-MR, Kushkevych I. Bafilomycin A1 Molecular Effect on ATPase Activity of Subcellular Fraction of Human Colorectal Cancer and Rat Liver. International Journal of Molecular Sciences. 2024 Feb;25(3):1657. Epub 2024 Jan 29. doi: 10.3390/ijms25031657
Dokulil M, Teubner K. Long‑term adjustment of phytoplankton structure to environmental traits at timescales during lifetime development and over generations. Hydrobiologia: the international journal on limnology and marine sciences. 2024 Feb;851(4):823-847. doi: 10.1007/s10750-023-05365-6
Schwarzerova J, Zeman M, Babak V, Jureckova K, Nykrynova M, Varga M et al. Detecting horizontal gene transfer among microbiota: an innovative pipeline for identifying co-shared genes within the mobilome through advanced comparative analysis. Microbiology Spectrum. 2024 Jan 11;12(1):e0196423. doi: 10.1128/spectrum.01964-23
Salas E, Gorfer M, Bandian D, Eichorst SA, Schmidt H, Horak J et al. Reevaluation and novel insights into amino sugar and neutral sugar necromass biomarkers in archaea, bacteria, fungi, and plants. Science of the Total Environment. 2024 Jan 1;906:167463. Epub 2023 Oct 5. doi: 10.1016/j.scitotenv.2023.167463
Saccò M, Mammola S, Altermatt F, Alther R, Bolpagni R, Brancelj A et al. Groundwater is a hidden global keystone ecosystem. Global Change Biology. 2024 Jan;30(1):e17066. doi: 10.1111/gcb.17066
Zwander S, Chaturvedi P, Ghatak A, Weckwerth W, Marko D, Castejon Caballero N. Integrating eco-friendly approaches to produce protein extracts and hydrolysates with antioxidant properties from Microchloropsis gaditana. Algal Research. 2024 Jan;77:103368. doi: 10.1016/j.algal.2023.103368