Publications

Hohla M, Korsch H, Hofbauer M, Bernhardt KG, Diewald W, Foissner I et al. Characeen Österreichs. Checkliste, Atlas und Rote Liste der Armleuchteralgen (Charophyceae). Biosystematics and Ecology. 2025 Jul 23;4(e154327):e154327. doi: 10.1553/biosystecol.4.e154327, 10.1553/biosystecol.4.e154327

Markovski M, Najdek M, Zhao Z , Herndl GJ, Korlević M. Shift in the metabolic profile of sediment microbial communities during seagrass decline. Environmental Microbiome. 2025 Jul 22;20(1):93. doi: 10.1186/s40793-025-00750-1

Masdeu-Navarro M, Cabrera-Brufau M, Xue L, Rodríguez-Ros P, Gardner SG, Bergauer K et al. The seascape of VOC production and cycling in a tropical coral reef. Elementa. 2025 Jul 10;13(1):00014. doi: 10.1525/elementa.2025.00014

Plott S, Dagdas Y, Ibl V. Microautophagy in cereal grains: protein storage or degradation? Trends in Plant Science. 2025 Jul;30(7):736-744. doi: 10.1016/j.tplants.2024.12.012

Tillmanns J, Battisti V, Kicuntod J, Hahn F, Obergfäll D, Geiger P et al. The conserved core nuclear egress complex (NEC) as an antiherpesviral drug target: Pharmacophore-based identification of NEC-specific inhibitors. Antiviral Research. 2025 Jul;239:106168. doi: 10.1016/j.antiviral.2025.106168

Raubitzek S, Hartlieb M , König P, Hinderling J, Mallinger K. Multi-Class Machine Learning to Quantify the Impact of Nitrogen Management Practices on Grassland Biomass. Nitrogen. 2025 Jun 30. doi: 10.3390/nitrogen6030052

He Y, Zhang H, Baltar F, Wang Y. Transcriptional Difference of Deep-Sea Microorganisms under Different Sampling Methods. Environmental Science & Technology. 2025 Jun 17;59(23):11653-11665. doi: 10.1021/acs.est.4c05624

Massela MCM, Belibasakis G, Wester G, Manzo M, Jaladurgam NR, Rittmann SKMR. Real Stories. In Perrson T, editor, Job Hunting for the 21st CenturyA Comprehensive Guide for the Modern PhD. Vol. 2. Royal Society of Chemistry. 2025. p. 108-138 doi: 10.1039/9781837677153-00108

Baquero DP, Borrel G, Gazi A, Martin-Gallausiaux C, Cvirkaite-Krupovic V, Commere PH et al. Biogenesis of DNA-carrying extracellular vesicles by the dominant human gut methanogenic archaeon. Nature Communications. 2025 Jun 3;16(1):5093. 5093. doi: 10.1038/s41467-025-60272-9

Pühringer M, Thür N, Schnurer M, Lamp LM, Panzenboeck L, Hartler J et al. Automated mass spectrometry-based profiling of multi-glycosylated glycosyl inositol phospho ceramides (GIPC) reveals specific series GIPC rearrangements during barley grain development and heat stress response. Plant Journal. 2025 Jun;122(6):e70279. doi: 10.1111/tpj.70279

Samrat R, Salas E, Fuchslueger L , Schmidt H, Gorfer M, Schagerl M et al. High-resolution lipidomics for decoding the soil biome: Improved lipid annotation, quantitation, and response to climate stress. Soil Biology and Biochemistry. 2025 Jun;209:109892. doi: 10.1016/j.soilbio.2025.109892

Klein M, Hilts AS, Fennessy RT, Trattnig N, Stehrer-Polášek T, Rittmann SKMR et al. Markerless mutagenesis enables isoleucine biosynthesis solely from threonine in Methanothermobacter marburgensis. Microbiology Spectrum. 2025 Jun;13(6):e0306824. Epub 2025 Apr 17. doi: 10.1128/spectrum.03068-24

Zhang C, He Y, Wang J, Chen T, Baltar F, Hu M et al. LucaPCycle: Illuminating microbial phosphorus cycling in deep-sea cold seep sediments using protein language models. Nature Communications. 2025 May 26;16(1):4862. 4862. doi: 10.1038/s41467-025-60142-4

Hou L, Zhao Z, Steger-Mähnert B, Jiao N, Herndl GJ, Zhang Y. Microbial metabolism in laboratory reared marine snow as revealed by a multi-omics approach. Microbiome. 2025 May 6;13(1):114. 114. doi: 10.1186/s40168-025-02097-8

Wollweber F, Xu J, Ponce-Toledo RI, Marxer F, Rodrigues-Oliveira T, Pössnecker A et al. Microtubules in Asgard archaea. Cell. 2025 May 1;188(9):2451-2464.e26. Epub 2025 Mar 19. doi: 10.1016/j.cell.2025.02.027

Hiralal A, Ley P, van Dijk JR, Li C, Pankratov D, Alingapoyil Choyikutty J et al. A novel cable bacteria species with a distinct morphology and genomic potential. Applied and Environmental Microbiology. 2025 May;91(5):e0250224. Epub 2025 Apr 22. doi: 10.1128/aem.02502-24

Klein T, Hodgskiss LH, Dreer MJ, Murrell JC, Hutchings MI, Schleper C et al. Distinct Patterns of Antibiotic Sensitivities in Ammonia-Oxidising Archaea. Environmental Microbiology. 2025 May;27(3):e70063. Epub 2025 Mar 11. doi: 10.1111/1462-2920.70063

Breyer E, Stix C, Kilker S, Roller BRK, Panagou F, Doebke C et al. The contribution of pelagic fungi to ocean biomass. Cell. 2025 May. doi: 10.1016/j.cell.2025.05.004

Ghatak A , Pierides I, Singh RK, Srivastava RK, Varshney RK, Prasad M et al. Millets for a sustainable future. Journal of Experimental Botany. 2025 Apr 9;76(6):1534-1545. Epub 2024 Dec 26. doi: 10.1093/jxb/erae507

Hussien N, Khalil M, Schagerl M, Ali S. Green Synthesis of Zinc Oxide Nanoparticles as a Promising Nanomedicine Approach for Anticancer, Antibacterial, and Anti-Inflammatory Therapies. International Journal of Nanomedicine. 2025 Apr;20:4299-4317. doi: 10.2147/IJN.S507214